List of the Top 10 Payment Processing Software for QuickBooks Desktop Pro in 2025

AvidXchange revolutionizes payment processes for businesses, enabling them to concentrate on their core priorities. Our accounts payable (AP) solutions empower clients to enhance efficiency, transparency, and authority within their AP workflows. Enhance Efficiency: Expedite the approval of invoices and minimize administrative burdens, allowing team members to engage in more critical initiatives. Boost Transparency & Authority: Achieve immediate insights into the status of invoices and payments while crafting personalized workflows to align with your approval requirements. Access Anytime, Anywhere: Enhance productivity and eliminate delays by managing AP responsibilities around the clock. Moreover, AvidXchange, Inc. operates as a licensed money transmitter for B2B payments across the U.S., holding a Money Transmitter license from the New York State Department of Financial Services, along with other states necessitating such a license. This extensive regulatory compliance underscores our commitment to secure and reliable financial transactions.

BILL is a leading provider of cloud-based software that simplifies, digitizes, and automates back-office financial processes for small and mid-sized businesses. Our customers come from all industries, ranging from startups to established brands and nonprofits to franchises.

RetailEdge is an intuitive and comprehensive point of sale (POS) and inventory management software tailored for retail enterprises, developed by High Meadow Business Solutions. This platform encompasses multi-location capabilities, seamless credit card processing, website integration, and mobile POS functionality, alongside gift card management features. It also supports secure mobile payment options like Apple Pay and EMV, while integrating with various e-commerce platforms for streamlined order processing, price adjustments, and gift card management tasks. What sets us apart? 1. A one-time payment for the software eliminates ongoing fees. 2. The hybrid software architecture keeps all data locally stored, ensuring quick real-time access even during internet outages or slow connections. 3. It includes a complimentary hour of training with real experts, aimed at organizing your inventory effectively and guiding you through the myriad of robust tools available to enhance your business growth. 4. Optional ongoing support and updates are tailored to meet your business requirements affordably. 5. Our integrated credit card processing is equipped with the latest features, designed to secure the lowest transaction fees, enabling you to maximize your savings.

EBizCharge stands out as a premier provider of integrated payment solutions, enabling businesses to streamline electronic payment processing, bolster transaction security, and boost their profit margins. By equipping companies with the essential tools for faster, safer, and more cost-effective transactions, EBizCharge delivers a top-tier payment processing experience. Their applications adhere to PCI compliance and seamlessly integrate with leading ERP and accounting systems such as QuickBooks, various Sage ERP products, SAP Business One, Microsoft Dynamics, NetSuite, Epicor, and Acumatica, alongside major online shopping platforms like Magento, WooCommerce, and Volusion. This comprehensive integration ensures that businesses can operate efficiently while maintaining high standards of security and convenience.

Biller Genie is an innovative, cloud-based solution that has earned accolades for its effectiveness in automating accounts receivable and streamlining e-invoicing processes, beginning with bill presentation and extending to follow-up collections and reconciliation tasks. Seamlessly integrating with your existing accounting software, Biller Genie eliminates the need for new software training, allowing you to maintain your current payment processor while the system takes care of the laborious tasks. With just a click to save, the platform handles everything from emailing invoices and sending paper bills to following up with reminders based on your personalized schedule, as well as accepting various forms of online payments like credit cards, ACH, and Apple Pay, all while reconciling these transactions within your accounting system. Users typically experience a significant reduction of 40% in overdue invoices, receive payments an average of 15 days faster, and reclaim between 10 to 20 hours of administrative time each week. In a matter of minutes, you can effortlessly set up your account and start enjoying the benefits of this remarkable service. Biller Genie not only simplifies the invoicing process but also empowers businesses to improve their cash flow and operational efficiency.

SpotOn Restaurant stands out as a highly integrated and all-encompassing solution in the market. It provides an array of services, including a cloud-based POS system, commission-free online ordering, reservation management, and labor management software, catering to the needs of contemporary restaurant owners. Unlike many larger POS providers, it eliminates common frustrations such as lengthy contracts, unexpected fees and price increases, and a lack of personalized support. This makes it an appealing choice for those seeking a hassle-free experience in managing their restaurant operations effectively.

Our AP software, which operates in the cloud, streamlines invoicing and enhances your current accounts payable system, facilitating a smooth platform that empowers your accounts payable team to operate seamlessly from any location, whether remote or in-office. QBILLY serves as a cloud-based add-on for accounts payable that enables you to receive, monitor, route, approve, archive, and settle vendor invoices, all while integrating effortlessly with a wide range of accounting software systems. The straightforward setup process guided by wizards ensures that you can get started with minimal hassle. By providing financial stakeholders with easy access to AP information in a flexible and cost-efficient manner from any device, our software transforms the way you manage accounts payable. This innovative solution not only eradicates manual tasks but also significantly minimizes accounting inaccuracies, boosting overall productivity while cutting costs and promoting a paperless environment. Additionally, the user-friendly interface guarantees that even those less familiar with technology can navigate the system with ease.

PaymentCollect™ is a versatile plugin designed for the complete suite of QuickBooks®, enabling business owners to seamlessly handle credit card transactions directly within the software, using their preferred bank or payment processor. This tool is compatible with QuickBooks Desktop® versions dating back to 2004 and Point of Sale® versions from 2010 onwards, as well as the latest QuickBooks Online®. By facilitating the reception, processing, and automatic posting of payments into QuickBooks, PaymentCollect™ helps minimize overhead expenses and eliminate variable costs. Customers are given the convenience of paying their invoices either online or over the phone via this system. Additionally, PaymentCollect™ integrates smoothly with QuickBooks®, ensuring that invoices are automatically updated to reflect their "paid" status. This streamlined process not only enhances operational efficiency but also contributes to improved cash flow management for businesses.

Instant Accept features an efficient payment processing system that helps save both time and resources for merchants. It facilitates the entry of merchant data and the handling of credit card transactions while ensuring that QuickBooks information remains up to date. Capable of accepting various payment types, Instant Accept allows for quick and hassle-free transaction processing without the need to open your accounting software. The service is compatible with numerous processors across the U.S. and internationally, enabling the processing of card-not-present transactions and mobile payments. Despite its user-friendly interface, Instant Accept ensures that your financial records are updated in real-time and offers seamless integration for all facets of your financial operations, including billing and reporting. This platform empowers your customers to broaden their product offerings as you address their key challenges by integrating point-of-sale systems, online payments, and multiple accounting applications in a dynamic manner. Moreover, Instant Accept's versatility makes it an invaluable tool for adapting to the evolving needs of modern commerce.

No web developer? No problem! Lack of a website? That's absolutely fine! Even if you haven't communicated with your web developer in a long time, it remains hassle-free! Our committed team will create a personalized one-page Checkout that caters to your specific requirements, incorporating all vital messaging and information. By simply using a Facebook account, we can link it to our custom-branded, mobile-responsive Checkout Page. Our efficient and interactive invoicing solutions are crafted to save both you and your customers precious time, ensuring that payments are received more promptly. Whether you opt for weekly, monthly, quarterly, or any mix of billing cycles, ensuring a steady revenue stream for your business has never been easier with our service. Boost your non-profit's fundraising capabilities with our cost-effective, tailored donation pages that are optimized for mobile viewing. Regardless of whether you operate a large retail space or just a Facebook page and Instagram account, our mobile-friendly Checkouts are designed to mirror your brand's distinct look and feel, and they can be ready the same day, alongside your merchant account setup, enabling you to concentrate on what really matters. Additionally, our innovative solutions simplify enhancing your online transactions while allowing you to engage more effectively with your audience, creating a seamless experience for everyone involved. Let us help you take your online presence to the next level effortlessly.