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What is CZ CELLxGENE Discover?

Select two customized cell groups by leveraging metadata to identify their most distinctly expressed genes. Use the vast repository of millions of cells from the integrated CZ CELLxGENE database for comprehensive analysis. Engage in dynamic examinations of datasets to explore how gene expression patterns are shaped by spatial, environmental, and genetic factors through an intuitive no-code interface. This approach allows researchers to gain insights into existing datasets or utilize them as a springboard to uncover novel cell subtypes and states. Census enables access to any tailored segment of standardized cell data within the CZ CELLxGENE, with options for exploration in both R and Python environments. Immerse yourself in an interactive encyclopedia that features over 700 cell types, complete with detailed definitions, marker genes, lineage details, and related datasets all accessible in a single platform. In addition, researchers can browse and acquire an extensive array of standardized data collections, alongside more than 1,000 datasets that illuminate the functions of both healthy mouse and human tissues, significantly enhancing the study of cellular biology. This resource serves as an invaluable tool for scientists striving to deepen their understanding of cellular dynamics and gene expression, ultimately driving innovation in the field. Furthermore, the user-friendly interface promotes collaborative efforts among researchers, fostering a community of shared knowledge and discoveries.

What is Bokeh?

Bokeh streamlines the creation of standard visualizations while also catering to specific and unique needs. It provides users the ability to share plots, dashboards, and applications either on web platforms or directly within Jupyter notebooks. The Python ecosystem is rich with a variety of powerful analytical tools, such as NumPy, Scipy, Pandas, Dask, Scikit-Learn, and OpenCV, among many others. Featuring an extensive array of widgets, plotting options, and user interface events that activate real Python callbacks, the Bokeh server is essential for linking these tools to dynamic and interactive visualizations displayed in web browsers. Moreover, the Microscopium initiative, led by researchers at Monash University, harnesses Bokeh's interactive features to assist scientists in uncovering new functionalities of genes or drugs by allowing them to explore extensive image datasets. Another significant tool in this ecosystem is Panel, which focuses on producing polished data presentations and operates on the Bokeh server, enjoying support from Anaconda. Panel simplifies the process of building custom interactive web applications and dashboards by effortlessly connecting user-defined widgets to a variety of components, including plots, images, tables, or text. This seamless integration not only enhances the overall user experience but also cultivates an atmosphere that promotes effective data-driven decision-making and thorough exploration of complex datasets. Ultimately, the combination of these tools empowers users to engage with their data in innovative and meaningful ways.

Media

Media

Integrations Supported

Python
Google Maps
JavaScript
R

Integrations Supported

Python
Google Maps
JavaScript
R

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Pricing Information

Free
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

CZ CELLxGENE

Company Location

United States

Company Website

cellxgene.cziscience.com

Company Facts

Organization Name

Bokeh

Company Website

bokeh.org

Categories and Features

Categories and Features

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