Ratings and Reviews 0 Ratings

Total
ease
features
design
support

This software has no reviews. Be the first to write a review.

Write a Review

Ratings and Reviews 0 Ratings

Total
ease
features
design
support

This software has no reviews. Be the first to write a review.

Write a Review

Alternatives to Consider

  • 800.com Reviews & Ratings
    1,455 Ratings
    Company Website
  • Samsara Reviews & Ratings
    1,995 Ratings
    Company Website
  • BrandMap® 10 Reviews & Ratings
    Company Website
  • Jama Connect Reviews & Ratings
    321 Ratings
    Company Website
  • Ninox Reviews & Ratings
    541 Ratings
    Company Website
  • CallTrackingMetrics Reviews & Ratings
    844 Ratings
    Company Website
  • Fishbowl Reviews & Ratings
    1,041 Ratings
    Company Website
  • Highcharts Reviews & Ratings
    111 Ratings
    Company Website
  • Ant Media Server Reviews & Ratings
    201 Ratings
    Company Website
  • JS7 JobScheduler Reviews & Ratings
    Company Website

What is Loupe Browser?

Loupe Browser distinguishes itself as an effective visualization platform, equipped with intuitive features that are crucial for exploring and analyzing datasets from 10x Genomics Chromium and Visium. Furthermore, the LoupeR package streamlines the process of converting Seurat objects into formats that are compatible with Loupe Browser. The interactive capabilities of Loupe Browser are well-demonstrated through its application to a lung squamous cell carcinoma dataset. A key aspect of the user interface is the view panel, which displays individual points, each corresponding to a cell barcode, across various projections. Typically, each point represents the barcode of a single cell, facilitating detailed analysis. The default projection is a t-SNE plot generated by the cell ranger pipeline, but users also have access to other visualization options. They can easily drag the mouse over the cells to reposition the plot and utilize the mouse wheel or trackpad for zooming in or out. Additionally, when the mouse hovers over the plot, cluster labels appear, which is especially advantageous for analyzing datasets with many precomputed clusters. This feature significantly enriches the analytical process, allowing for easier identification and interpretation of intricate data patterns. With its user-centric design and functionality, Loupe Browser empowers researchers to gain deeper insights from their genomic data.

What is LatchBio?

Stop struggling with cloud infrastructure and unreliable informatics tools; start uncovering biological insights right away. The scientific quest is often impeded by the fragmented tools used by biology and bioinformatics teams. To solve this problem, we have created a cohesive bioinformatics platform that connects wet lab and dry lab activities in the cloud, allowing teams to accelerate their research and development projects. You can effortlessly import raw data from your cloud, service provider, or team’s instruments with minimal effort. Design and execute customized bioinformatics workflows in various programming languages without the annoyance of managing complex infrastructure. You can run any workflow seamlessly while keeping a detailed record of all analyses conducted. Our platform includes ready-to-use interactive visualizations for NGS data, enabling you to create point-and-click plots easily. Furthermore, Latch integrates smoothly with your organization’s AWS S3, providing access to vast amounts of data through a user-friendly organic filesystem. You can establish bioinformatics workflows and dynamically create no-code interfaces using Python, with flexible compute and storage options tailored to your requirements. This pioneering approach not only simplifies the research process but also enhances collaboration among teams, leading to more significant scientific breakthroughs. By transforming the way data is managed and analyzed, our platform empowers researchers to focus more on discovery than on technical hurdles.

Media

Media

Integrations Supported

Amazon S3

Integrations Supported

Amazon S3

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

10x Genomics

Date Founded

2012

Company Location

United States

Company Website

www.10xgenomics.com/support/software/loupe-browser/latest

Company Facts

Organization Name

LatchBio

Company Location

United States

Company Website

latch.bio/

Categories and Features

Categories and Features

Scientific Data Management System (SDMS)

Analytics
Artificial Intelligence (AI)
Audit
Centralized Data Repository
Collaboration
Compliance
Data Security
ELN Integration
LIMS Integration
Workflows

Popular Alternatives

GenomeStudio Reviews & Ratings

GenomeStudio

Illumina

Popular Alternatives

Nextflow Reviews & Ratings

Nextflow

Seqera Labs
Parse Biosciences Evercode Reviews & Ratings

Parse Biosciences Evercode

Parse Biosciences
Pluto Reviews & Ratings

Pluto

Pluto Biosciences
L7|ESP Reviews & Ratings

L7|ESP

L7 Informatics