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What is OMOPHub?

OMOPHub is a terminology API tailored for healthcare data professionals, health informatics engineers, and researchers working with OMOP and OHDSI datasets. It provides API access to a vast array of standardized clinical concepts derived from over 120 vocabularies, offering features like semantic and multilingual search, cross-vocabulary mappings, and tools for navigating hierarchies and interpreting clinical terms. For applications utilizing FHIR, it includes specialized terminology endpoints, and SDKs in Python, R, and Node.js are available to seamlessly integrate vocabulary lookups into data pipelines and software applications. Additionally, an MCP server is offered to provide terminology functionalities that are compatible with AI clients. OMOPHub proves to be essential for teams dedicated to clinical data normalization, ETL processes, cohort creation, analytics, and research workflows that demand reliable concept identifiers. This service operates as a SaaS API, featuring a free tier for basic needs, various paid plans to accommodate larger workloads, and options for private cloud deployment to suit specific organizational requirements. Moreover, its adaptable architecture allows for straightforward integration into current systems, significantly improving healthcare data management efficiency. By streamlining these processes, OMOPHub empowers teams to focus on deriving insights from clinical data rather than getting bogged down by terminology challenges.

What is Clinical Extract?

Clinical Extract can efficiently obtain research data from any electronic health record system that utilizes a certified bulk FHIR API, including well-known platforms such as Epic, Oracle Health (Cerner), athenahealth, eClinicalWorks, MEDITECH, NextGen, and Veradigm. The tool functions as a SMART Backend Services client within your existing infrastructure, employing read-only permissions and enabling the export of only the specified study group through a Group $export. It converts NDJSON into a detailed CSV format, complete with a data dictionary that correlates each column to its corresponding FHIR element, all while ensuring that patient data stays securely within your environment. Tailored specifically for cancer and clinical registries, it supports coded case and abstraction fields in line with the NAACCR layout and addresses the requirements of research informatics teams and ethical brokers by providing study-specific data collections alongside an IRB-compliant data dictionary. Additionally, it aids research sites in evaluating clinical trial feasibility based on established coded criteria. Among its key capabilities are a cohort builder, roster extraction using FHIR $match, and the creation of both the CSV and data dictionary, plus a specialized oncology perspective that highlights biomarkers and TNM stage as distinctly labeled columns for straightforward analysis. This holistic method significantly improves the accessibility and applicability of essential health data for a variety of research initiatives, thereby streamlining the overall research process. Ultimately, Clinical Extract serves as a vital resource for enhancing the efficiency and effectiveness of health data research.

Media

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Media

No images available

Integrations Supported

Model Context Protocol (MCP)

Integrations Supported

API Availability

Has API

API Availability

Pricing Information

$0/month
Free: $0/month for 3,000 API calls per month, with no overage charges. Pro: $39/month for up to 50,000 calls; Scale: $79/month for up to 125,000 calls; Business: $149/month for up to 250,000 calls. Private Cloud deployment is available for AWS, Google Cloud, or Azure.
Free Version

Pricing Information

Pricing not provided

Supported Platforms

SaaS

Supported Platforms

On-Prem
Linux

Customer Service / Support

Web-Based Support

Customer Service / Support

Web-Based Support

Training Options

Documentation Hub

Training Options

Documentation Hub

Company Facts

Organization Name

OMOPHub

Date Founded

2025

Company Location

Czech Republic

Company Website

omophub.com

Company Facts

Organization Name

Saga IT

Date Founded

2016

Company Location

United States

Company Website

clinicalextract.com

Categories and Features

Healthcare APIs

Not specified

Categories and Features

Healthcare Analytics

Not specified

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