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What is alvaMolecule?

alvaMolecule is a no-code cheminformatics platform that enables users to visualize, curate, and standardize molecular datasets in preparation for analytical work. It supports widely-used molecular formats like SMILES and SDF/MOL2, allowing seamless navigation through collections in either grid or spreadsheet views while automatically importing pertinent data. The platform guarantees structure verification and standardization through built-in standardizers and customizable SMIRKS rules, aids in the detection and management of duplicates, and offers scaffold analysis to summarize essential frameworks. Moreover, it includes integrated filtering and charting features that enable sorting by substructures, calculated molecular descriptors, and various physicochemical properties. alvaMolecule can calculate approximately 88 structural and physicochemical properties, which include drug-like and lead-like scoring metrics such as LogP, TPSA, and the Lipinski alert index, ultimately supporting users in creating high-quality datasets for QSAR/QSPR modeling, descriptor computations, and virtual screening tasks. In addition, its intuitive interface makes it accessible for researchers of all coding skill levels, allowing them to effectively enhance their cheminformatics endeavors and streamline their research processes.

What is AutoDock?

AutoDock is a suite of automated docking tools designed to predict how small molecules, such as potential drugs or substrates, bind with receptors that possess a known three-dimensional structure. Over the years, this toolkit has seen numerous upgrades and improvements that have led to the creation of multiple docking engines. Presently, AutoDock features two main versions: AutoDock 4 and AutoDock Vina. A recent innovation, AutoDock-GPU, has been launched, significantly speeding up the docking processes of AutoDock 4 to rates that are several hundred times faster than the original single-CPU version. At its core, AutoDock 4 consists of two fundamental applications: autodock, which manages the docking of ligands to a grid representation of the target protein, and autogrid, which pre-calculates these grids. In addition to their primary role in docking, the atomic affinity grids produced can be visualized, offering essential insights that may aid organic synthetic chemists in designing more effective binders for their research endeavors. This visual capability not only enhances the understanding of binding interactions but also fosters a more seamless integration between computational models and tangible results in the realm of drug development.

Media

Media

Integrations Supported

YouMi

Integrations Supported

YouMi

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

Alvascience

Date Founded

2018

Company Location

Italy

Company Website

www.alvascience.com

Company Facts

Organization Name

AutoDock

Company Website

autodock.scripps.edu/

Categories and Features

Categories and Features

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