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What is ruffus?

Ruffus is a Python library tailored for building computation pipelines, celebrated for its open-source nature, robustness, and ease of use, which makes it especially favored in scientific and bioinformatics applications. This tool facilitates the automation of scientific and analytical processes with minimal complexity, efficiently handling both simple and highly intricate workflows that may pose challenges for conventional tools like make or scons. Rather than relying on intricate tricks or pre-processing methods, it adopts a clear and lightweight syntax that emphasizes functionality. Available under the permissive MIT free software license, Ruffus can be utilized freely and integrated into proprietary software as well. For best results, users are encouraged to run their pipelines in a designated “working” directory, separate from their original datasets, to ensure organization and efficiency. Serving as a flexible Python module for creating computational workflows, Ruffus requires Python version 2.6 or newer, or 3.0 and later, which guarantees its functionality across diverse computing environments. Its straightforward design and high efficacy render it an indispensable asset for researchers aiming to advance their data processing efficiencies while keeping their workflow management simple and effective.

What is Mako?

Mako presents a straightforward, non-XML syntax that compiles into efficient Python modules for superior performance. Its design and API take cues from a variety of frameworks including Django, Jinja2, Cheetah, Myghty, and Genshi, effectively combining the finest aspects of each. Fundamentally, Mako operates as an embedded Python language, similar to Python Server Pages, and enhances traditional ideas of componentized layouts and inheritance to establish a highly effective and versatile framework. This architecture closely aligns with Python's calling and scoping rules, facilitating smooth integration with existing Python code. Since templates are compiled directly into Python bytecode, Mako is designed for remarkable efficiency, initially aimed to achieve the performance levels of Cheetah. Currently, Mako's speed is almost equivalent to that of Jinja2, which uses a comparable approach and has been influenced by Mako itself. Additionally, it offers the capability to access variables from both its parent scope and the template's request context, allowing developers increased flexibility and control. This feature not only enhances the dynamic generation of content in web applications but also streamlines the development process, making it easier for developers to create sophisticated templating solutions. Overall, Mako stands out as a powerful tool for building efficient web applications with its unique blend of performance and usability.

Media

Media

Integrations Supported

Python

Integrations Supported

Python
Coverage.py
Django
New Relic
SmartPOS by Petrosoft

API Availability

API Availability

Has API

Pricing Information

Free
Free Version

Pricing Information

Free
Free Version

Supported Platforms

Windows
Mac
Linux

Supported Platforms

Windows
Mac
Linux

Customer Service / Support

Web-Based Support

Customer Service / Support

Web-Based Support

Training Options

Documentation Hub

Training Options

Documentation Hub

Company Facts

Organization Name

ruffus

Company Website

www.ruffus.org.uk

Company Facts

Organization Name

Mako

Company Website

www.makotemplates.org

Categories and Features

Bioinformatics

Not specified

Component Libraries

Not specified

Categories and Features

Component Libraries

Not specified

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