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What is ESMFold2?

Building upon its predecessor, ESMFold, ESMFold2 sets a new standard in the realm of single-sequence structure prediction while also enabling the design of novel functional proteins by delving into the latent space of the ESMC model. This sophisticated model can accurately predict high-resolution, all-atom 3D structures of biomolecular complexes directly from amino acid sequences and incorporates multiple sequence alignments to enhance accuracy for challenging targets. Designed to predict structures using both sequence and structural modalities, it utilizes ESM representations that power a sequence of looped folding layers, while a diffusion model converts pairwise representations into atomic-resolution results. ESMFold2 stands out in its ability to forecast protein structures from amino acid sequences, providing comprehensive structural information, including exact all-atom coordinates for backbone and side chains, as well as confidence metrics and optional distogram predictions for thorough structural analysis. In addition, its groundbreaking methodology deepens the understanding of protein folding dynamics and their functional implications, positioning it as an indispensable tool for researchers engaging in this area of study. Ultimately, ESMFold2 not only advances structural biology but also opens new avenues for the development of protein-based applications.

What is ESMFold?

ESMFold exemplifies how artificial intelligence can provide us with groundbreaking tools to investigate the natural world, similar to how the microscope transformed our ability to see the intricate details of life. By leveraging AI, we can achieve new insights into the rich tapestry of biological diversity, thus deepening our understanding of life sciences. A considerable amount of AI research focuses on teaching machines to perceive the world in ways that parallel human cognition. However, the intricate language of proteins remains difficult for humans to interpret and has posed challenges for even the most sophisticated computational models. Despite these hurdles, AI has the potential to decode this complex language, thereby enhancing our understanding of biological mechanisms. Investigating AI's role in biology not only broadens our comprehension of life sciences but also illuminates the wider implications of artificial intelligence as a whole. Our research underscores the interconnected nature of various disciplines: the large language models that drive advancements in machine translation, natural language processing, speech recognition, and image generation also have the potential to uncover valuable insights into biological systems. This interdisciplinary strategy may lead to groundbreaking discoveries in both the fields of AI and biology, fostering collaboration that could yield transformative advancements. As we continue to explore these synergies, the future holds great promise for expanding our knowledge and capabilities in understanding life itself.

Media

Media

Integrations Supported

Biohub
Python

Integrations Supported

Biohub
Python

API Availability

Has API

API Availability

Has API

Pricing Information

Free
Free Trial Offered?
Free Version

Pricing Information

Free
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

Biohub

Date Founded

2016

Company Location

United States

Company Website

biohub.ai/models/esmfold2

Company Facts

Organization Name

Meta

Date Founded

2004

Company Location

United States

Company Website

github.com/facebookresearch/esm

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