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What is Galaxy?

Galaxy is an open-source, web-oriented platform tailored for managing data-rich research within the biomedical sector. New users are encouraged to start with the basic introductory resources or seek out the extensive help options available to them. Additionally, it is possible to establish a personal instance of Galaxy by following a comprehensive tutorial while choosing from a broad selection of tools provided in the tool shed. The current operational Galaxy instance benefits from the infrastructure offered by the Texas Advanced Computing Center. Moreover, further resources can be accessed through the Jetstream2 cloud, which is enabled by ACCESS and backed by the National Science Foundation. Researchers have the ability to quantify, visualize, and summarize discrepancies found in deep sequencing datasets while also constructing maximum-likelihood phylogenetic trees. The platform also facilitates phylogenomic and evolutionary tree construction with multiple sequences, enables the clustering of matching reads using the TN-93 method, and allows for the exclusion of sequences from a reference within a designated distance of a cluster. Additionally, researchers can perform maximum-likelihood estimations to determine gene essentiality scores, reinforcing Galaxy's status as an invaluable instrument for diverse genomic research applications. With its robust capabilities and user-friendly design, Galaxy continues to advance the frontiers of biomedical research.

What is AlphaGenome 2?

AlphaGenome 2 represents a cutting-edge AI research platform designed to investigate how DNA sequences influence gene regulation and related molecular processes. By entering specific DNA sequences, the framework can predict various molecular traits, thus aiding scientists in their exploration of gene expression patterns, regulatory functions, splicing, chromatin accessibility, and other genomic factors. Tailored for researchers aiming to unravel gene functionalities, the consequences of genetic variations, and disease biology, it serves both academic institutions and noncommercial research organizations. The platform is conveniently accessible through an online API, which offers developer tools that streamline the sequence submission process and facilitate the retrieval of predictions that are essential for computational studies. This empowers researchers to effectively prioritize their hypotheses and shape their upcoming experimental designs. It is essential to highlight that AlphaGenome 2 is exclusively intended for research purposes and has not been validated or authorized for any clinical or diagnostic applications, emphasizing the need for users to understand its intended use and limitations. This focus on research underscores the necessity of responsible practices in scientific exploration, ensuring that users remain cognizant of the framework's capabilities and constraints. Researchers utilizing this tool can significantly enhance their understanding of complex genomic interactions.

Media

Media

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Integrations Supported

Arch
CoinRoutes
Inn-Flow
Lybra Assistant

Integrations Supported

API Availability

Has API

API Availability

Has API

Pricing Information

Free
Free Version

Pricing Information

The AlphaGenome API is free of charge for noncommercial use. Commercial research access is in private preview.
Free Version

Supported Platforms

SaaS

Supported Platforms

SaaS

Customer Service / Support

Web-Based Support

Customer Service / Support

Not specified

Training Options

Documentation Hub

Training Options

Documentation Hub

Company Facts

Organization Name

Galaxy

Company Location

United States

Company Website

usegalaxy.org

Company Facts

Organization Name

Google DeepMind

Date Founded

2010

Company Location

United Kingdom

Company Website

deepmind.google/science/alphagenome/

Categories and Features

Bioinformatics

Not specified

Categories and Features

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