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What is NAMD?

NAMD stands as a high-performance parallel molecular dynamics software designed explicitly for simulating large biomolecular systems. It employs Charm++ parallel objects, enabling it to scale effectively from everyday personal computers to sophisticated parallel systems, handling hundreds of cores for typical simulations and even surpassing 500,000 cores for the most complex scenarios. This software is crafted for scientists focused on executing efficient simulations of extensive molecular systems while ensuring it integrates seamlessly with widely used molecular modeling workflows. NAMD works in conjunction with the renowned molecular graphics tool VMD, facilitating both the setup of simulations and the analysis of trajectories, while ensuring compatibility with file formats from AMBER, CHARMM, and X-PLOR. Additionally, it is meticulously designed to support biomolecular simulations involving proteins, membranes, nucleic acids, solvents, ions, and various other molecular entities, thereby allowing for a detailed investigation of atomic interactions and dynamic processes over time. Researchers can thus depend on NAMD for valuable insights into the complexities of molecular dynamics, ultimately enhancing their understanding of the underlying biological mechanisms at play.

What is LAMMPS?

LAMMPS, an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator, is an advanced molecular dynamics software specifically designed for simulating materials. It can effectively model a variety of particle ensembles in different phases, including liquids, solids, and gases, and supports a wide array of systems such as atomic, polymeric, biological, solid-state, granular, and more, by employing numerous interatomic potentials, force fields, and boundary conditions. Tailored for both two-dimensional and three-dimensional simulations, LAMMPS is capable of managing systems that range from a few particles to billions, providing efficient operation on parallel computing platforms while remaining accessible for users looking to modify or expand its capabilities. The software includes potentials suitable for a range of solid-state materials, including metals and semiconductors, as well as softer materials like biomolecules and polymers, and accommodates both coarse-grained and mesoscopic systems. Moreover, LAMMPS not only excels in modeling atomic interactions but also serves as a flexible parallel particle simulator that can be applied across different scales, such as atomic, mesoscopic, or continuum, thereby establishing itself as an essential tool in the field of computational materials science. Its versatility and efficiency make it a popular choice for researchers seeking to explore complex material behaviors through simulation.

Media

Media

Integrations Supported

Additional information not provided

Integrations Supported

Additional information not provided

API Availability

Has API

API Availability

Has API

Pricing Information

Free
Free Trial Offered?
Free Version

Pricing Information

Free
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

Theoretical and Computational Biophysics Group

Date Founded

2006

Company Location

United States

Company Website

www.ks.uiuc.edu/Research//namd/

Company Facts

Organization Name

LAMMPS

Company Location

United States

Company Website

www.lammps.org

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