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What is PacBio?

Pacific Biosciences, commonly known as PacBio, stands at the forefront of life science technology, creating and producing cutting-edge sequencing solutions that empower scientists and clinical researchers to tackle complex genetic challenges. Their offerings span a wide array of research fields, including human germline sequencing, the study of plant and animal sciences, microbiology and infectious diseases, oncology, along with various emerging applications. The Revio system enhances accessibility and efficiency while maintaining the high-quality features of long reads, outstanding accuracy, and direct detection of methylation. In addition, the Onso system serves as a groundbreaking benchtop platform for short-read DNA sequencing, achieving remarkable accuracy through PacBio's innovative sequencing technique. Furthermore, the software tools designed for the Sequel II/IIe and Revio systems facilitate the setup and monitoring of long-read HiFi sequencing operations, allowing users to review performance metrics and effectively analyze, visualize, and annotate their sequencing data for deeper insights. Together, these systems and tools represent a significant advancement in the capabilities available to researchers in genomics.

What is Galaxy?

Galaxy is an open-source, web-oriented platform tailored for managing data-rich research within the biomedical sector. New users are encouraged to start with the basic introductory resources or seek out the extensive help options available to them. Additionally, it is possible to establish a personal instance of Galaxy by following a comprehensive tutorial while choosing from a broad selection of tools provided in the tool shed. The current operational Galaxy instance benefits from the infrastructure offered by the Texas Advanced Computing Center. Moreover, further resources can be accessed through the Jetstream2 cloud, which is enabled by ACCESS and backed by the National Science Foundation. Researchers have the ability to quantify, visualize, and summarize discrepancies found in deep sequencing datasets while also constructing maximum-likelihood phylogenetic trees. The platform also facilitates phylogenomic and evolutionary tree construction with multiple sequences, enables the clustering of matching reads using the TN-93 method, and allows for the exclusion of sequences from a reference within a designated distance of a cluster. Additionally, researchers can perform maximum-likelihood estimations to determine gene essentiality scores, reinforcing Galaxy's status as an invaluable instrument for diverse genomic research applications. With its robust capabilities and user-friendly design, Galaxy continues to advance the frontiers of biomedical research.

Media

Media

Integrations Supported

Integrations Supported

Arch
CoinRoutes
Inn-Flow
Lybra Assistant

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided

Pricing Information

Free
Free Version

Supported Platforms

SaaS

Supported Platforms

SaaS

Customer Service / Support

Standard Support
Web-Based Support

Customer Service / Support

Web-Based Support

Training Options

Documentation Hub
Webinars

Training Options

Documentation Hub

Company Facts

Organization Name

Pacific Biosciences (PacBio)

Date Founded

2004

Company Location

United States

Company Website

www.pacb.com/products-and-services/

Company Facts

Organization Name

Galaxy

Company Location

United States

Company Website

usegalaxy.org

Categories and Features

LIMS

Not specified

Categories and Features

Bioinformatics

Not specified

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