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What is PyMOL?

PyMOL is a molecular visualization software that operates as a user-supported open-source project, with its management and distribution handled by Schrödinger. The transition to the PyQt interface has replaced Tcl/Tk and MacPyMOL across all systems, which has greatly improved the overall user experience. This platform provides enhanced compatibility for third-party plugins and custom scripting, establishing it as a robust tool for visualizing and animating three-dimensional molecular structures. Additionally, a plug-in enables users to seamlessly integrate 3D images and animations into PowerPoint presentations, facilitating better communication of scientific concepts. While PyMOL is commercially licensed, a significant portion of its source code is available for free under a permissive license, supporting its open-source nature. This initiative is primarily funded by the sales of PyMOL licenses, with Schrödinger playing a key role in its sustainability. Users enjoy the advantages of open access to executables and a flexible evaluation system, allowing them to explore the software's capabilities thoroughly. Recent updates have introduced an improved fuse command that eliminates hypervalent bonds, substituting them with monovalent atoms, and a new properties inspector that allows settings to be unset using the “delete” key for greater user control. Moreover, the resolution issues that previously caused the workspace to disappear have been addressed, enhancing the overall user experience significantly. As a result, users can now work more effectively, enjoying a more polished and reliable interface.

What is Nanome?

Nanome is an innovative platform that facilitates collaborative molecular visualization and enhances drug discovery efforts. Users can conveniently upload protein and small-molecule structures to analyze together in a three-dimensional view, which can be accessed via web browsers or various XR headsets, including the Meta Quest 3 and 3S, Apple Vision Pro, and Samsung Galaxy XR. In a collaborative session, participants, such as a chemist using a headset alongside a colleague on a laptop, can collectively focus on the same molecular aspects regardless of their physical locations. The platform is equipped with MARA, an AI copilot that adeptly handles tasks such as docking, co-folding, electrostatics calculations, and ADMET predictions by interpreting simple, natural language commands and utilizes more than 300 integrated scientific tools to generate 3D models for deeper analysis. Furthermore, Nanome accommodates a wide range of file formats including PDB, mmCIF, SDF, MOL2, PyMOL, and Maestro, and it connects seamlessly with various platforms like Schrodinger LiveDesign, OpenEye, Cresset Flare, CDD Vault, KNIME, and Jupyter. For enterprises, deployment options are available in single-tenant or on-premises configurations, which bolster security and governance. Users can access a free web seat, and there's a trial period of 14 days that does not require a credit card for initiation. By bridging the gap between technology and molecular science, Nanome is truly transforming the collaborative landscape for research teams.

Media

Media

No images available

Integrations Supported

Laby
Microsoft PowerPoint
Python

Integrations Supported

API Availability

API Availability

Pricing Information

Pricing not provided
Free Version

Pricing Information

$20.83/month/user (academic)
Free Version
Free Trial Offered?

Supported Platforms

Windows
Mac
Linux

Supported Platforms

SaaS
Windows
On-Prem

Customer Service / Support

Web-Based Support

Customer Service / Support

Web-Based Support

Training Options

Documentation Hub

Training Options

Documentation Hub
Webinars
Online Training

Company Facts

Organization Name

PyMOL

Company Location

Germany

Company Website

pymol.org/2/

Company Facts

Organization Name

Nanome

Date Founded

2015

Company Location

United States

Company Website

nanome.ai

Categories and Features

Molecular Modeling

Not specified

Categories and Features

Drug Discovery

Not specified

Molecular Modeling

Not specified

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