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What is PyQtGraph?

PyQtGraph is a comprehensive graphics and GUI library crafted entirely in Python, leveraging PyQt/PySide and NumPy, and is specifically tailored for applications in fields such as mathematics, science, and engineering. Although fully implemented in Python, this library demonstrates outstanding performance by efficiently using NumPy for numerical calculations and the Qt GraphicsView framework for optimal rendering efficiency. Available under the MIT open-source license, PyQtGraph provides essential 2D plotting capabilities through interactive view boxes, allowing for the creation of line and scatter plots that users can easily manipulate with mouse controls for panning and scaling. The library's compatibility with various data types, including integers and floats of different bit depths, is enhanced by its ability to slice multidimensional images from multiple angles, making it extremely valuable for tasks like MRI data analysis. Additionally, it supports quick updates, making it ideal for video displays or real-time interactions, and offers image display functionalities that feature interactive lookup tables and level adjustments. Moreover, the library includes mesh rendering capabilities along with isosurface generation, and its interactive viewports enable users to effortlessly rotate and zoom using mouse gestures. It also integrates a straightforward 3D scenegraph, which streamlines the development process for visualizing three-dimensional data. With its extensive range of features, PyQtGraph not only meets diverse visualization requirements but also significantly enhances the user experience through its interactive design, making it a powerful tool across various scientific and engineering applications. This versatility ensures that users can effectively communicate complex data in an engaging manner.

What is Loupe Browser?

Loupe Browser distinguishes itself as an effective visualization platform, equipped with intuitive features that are crucial for exploring and analyzing datasets from 10x Genomics Chromium and Visium. Furthermore, the LoupeR package streamlines the process of converting Seurat objects into formats that are compatible with Loupe Browser. The interactive capabilities of Loupe Browser are well-demonstrated through its application to a lung squamous cell carcinoma dataset. A key aspect of the user interface is the view panel, which displays individual points, each corresponding to a cell barcode, across various projections. Typically, each point represents the barcode of a single cell, facilitating detailed analysis. The default projection is a t-SNE plot generated by the cell ranger pipeline, but users also have access to other visualization options. They can easily drag the mouse over the cells to reposition the plot and utilize the mouse wheel or trackpad for zooming in or out. Additionally, when the mouse hovers over the plot, cluster labels appear, which is especially advantageous for analyzing datasets with many precomputed clusters. This feature significantly enriches the analytical process, allowing for easier identification and interpretation of intricate data patterns. With its user-centric design and functionality, Loupe Browser empowers researchers to gain deeper insights from their genomic data.

Media

Media

Integrations Supported

Python

Integrations Supported

Python

API Availability

Has API

API Availability

Has API

Pricing Information

Free
Free Trial Offered?
Free Version

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

PyQtGraph

Company Website

www.pyqtgraph.org

Company Facts

Organization Name

10x Genomics

Date Founded

2012

Company Location

United States

Company Website

www.10xgenomics.com/support/software/loupe-browser/latest

Categories and Features

Categories and Features

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