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Ratings and Reviews 0 Ratings
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What is Universal Analysis Software (UAS)?
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What is Cufflinks?
Cufflinks is a software solution designed to compile transcript data, estimate their relative abundance, and analyze differential expression and regulation within RNA-Seq datasets. By processing aligned RNA-Seq reads, it organizes these into a coherent representation of transcripts. The software evaluates the relative levels of these transcripts using the number of supporting reads while considering biases introduced during library preparation. Originally developed in partnership with the Laboratory for Mathematical and Computational Biology, Cufflinks seeks to streamline the installation process by providing various binary packages that mitigate the often challenging task of building the software from its source code, which typically requires the installation of multiple libraries. This toolset includes several utilities aimed at RNA-Seq experiment analysis, with some features available for standalone use and others designed to integrate into a broader analytical workflow. Furthermore, Cufflinks is essential for genomics researchers, as it significantly enhances their capacity to interpret RNA-Seq data and derive meaningful insights from their experiments. With its user-friendly approach, Cufflinks continues to support advancements in genomic research methodologies.
Integrations Supported
Additional information not provided
Integrations Supported
Additional information not provided
API Availability
Has API
API Availability
Has API
Pricing Information
Pricing not provided.
Free Trial Offered?
Free Version
Pricing Information
Free
Free Trial Offered?
Free Version
Supported Platforms
SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux
Supported Platforms
SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux
Customer Service / Support
Standard Support
24 Hour Support
Web-Based Support
Customer Service / Support
Standard Support
24 Hour Support
Web-Based Support
Training Options
Documentation Hub
Webinars
Online Training
On-Site Training
Training Options
Documentation Hub
Webinars
Online Training
On-Site Training
Company Facts
Organization Name
Verogen
Date Founded
2017
Company Location
United States
Company Website
verogen.com/products/universal-analysis-software/
Company Facts
Organization Name
Cole Trapnell
Date Founded
2017
Company Location
United States
Company Website
cole-trapnell-lab.github.io/cufflinks/
Categories and Features
Medical Lab
Audit Trail
Data Analysis Auditing
Data Security
EMR Interface
Fax Management
Lab Instrument Interface
Multi-Location Printing
Online Instrumentation
Physician Test Panels
Procedure-Based Billing
Sample Tracking