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What is Evo Designer?

Evo Designer, an innovative instrument developed by the Arc Institute, leverages the capabilities of the Evo 2 genomic foundation model to assist in both the creation and examination of DNA sequences. By allowing users to input nucleotide sequences or choose particular organisms, the platform generates tailored DNA sequences that meet specific research requirements. Moreover, it provides comprehensive annotations for coding regions and enables 3D visualizations of prokaryotic protein structures through ESMFold, thereby deepening users' comprehension of protein architecture. Additionally, Evo Designer assesses the complexity of sequences by calculating perplexity and per-nucleotide entropy, offering researchers insights into the variability of their data. Central to this tool is the Evo 2 model, which has been trained on a vast dataset exceeding 9 trillion nucleotides from a diverse range of prokaryotic and eukaryotic genomes. Harnessing an advanced deep learning framework, this model accurately represents biological sequences at a single-nucleotide level and can accommodate a context window of up to 1 million tokens, ensuring meticulous sequence analysis. The diverse features offered by Evo Designer significantly enhance genetic research, making it a crucial asset for scientists in the field. As a result, the tool not only streamlines the process of DNA sequence analysis but also fosters deeper insights into genetic structures and their functions.

What is ESMC?

ESMC marks the latest innovation in the ESM series of protein language models, advancing the understanding of representation learning in protein biology. By training on an enormous dataset of billions of evolutionary sequences, it effectively captures representations that provide insights into the mechanistic aspects of protein structure and function. Utilizing a transformer architecture, the model prioritizes sequences as its main input and is trained on a dataset that includes up to 6 billion proteins. ESMC is designed for a range of applications within protein science, including structure prediction, functional annotation, protein design, and the investigation of evolutionary relationships among proteins. Furthermore, it has the ability to generate new proteins from partial sequences, structures, or specific functional requirements, which allows researchers to explore novel possibilities in protein design and biological research. The model is readily accessible through the Biohub Platform, enabling users to interact with it via an API and the ESM Python package, which offers quickstart resources for installation, API key generation, and connection to the platform, thus ensuring a user-friendly experience. This ease of access not only promotes wider participation in protein research but also fosters collaborative efforts across the scientific community, ultimately driving further advancements in the field. With its capabilities, ESMC opens new doors for innovation and discovery in protein science.

Media

Media

Integrations Supported

Evo 2

Integrations Supported

Biohub
Python

API Availability

API Availability

Has API

Pricing Information

Pricing not provided

Pricing Information

Free
Free Version

Supported Platforms

SaaS

Supported Platforms

SaaS

Customer Service / Support

Web-Based Support

Customer Service / Support

Web-Based Support

Training Options

Documentation Hub
On-Site Training

Training Options

Documentation Hub

Company Facts

Organization Name

Arc Institute

Company Location

United States

Company Website

arcinstitute.org/tools/evo/evo-designer

Company Facts

Organization Name

Biohub

Date Founded

2016

Company Location

United States

Company Website

biohub.ai/models/esmc

Categories and Features

Bioinformatics

Not specified

Molecular Modeling

Not specified

Categories and Features

AI Models

Not specified

AI Science

Not specified

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