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What is Swiss-PdbViewer?

Swiss-PdbViewer, often referred to as DeepView, is a user-friendly software application designed for the concurrent analysis of multiple proteins. It allows users to align these proteins to assess structural similarities and inspect essential elements, including active sites. The software streamlines the acquisition of data regarding amino acid substitutions, hydrogen bonds, angles, and atomic distances via its straightforward graphical interface and menu options. Created by Nicolas Guex in 1994, Swiss-PdbViewer was initially designed to work closely with SWISS-MODEL, an automated homology modeling server established by the Swiss Institute of Bioinformatics (SIB) within the Structural Bioinformatics Group at the Biozentrum in Basel. As SWISS-MODEL's web interface has evolved over the years, enhancing its functionality for sophisticated modeling tasks, the need for a direct link to Swiss-PdbViewer has diminished, resulting in the cessation of its support. This shift illustrates the ongoing advancements in bioinformatics tools and the increasing complexity of their features. Consequently, users now enjoy a broader array of capabilities that reflect the rapidly changing landscape of protein modeling and analysis.

What is 3decision?

3decision® is a cutting-edge cloud-hosted platform designed to serve as a centralized hub for protein structures, emphasizing effective management of structural data and advanced analytics to accelerate the identification of small molecules and biologics through structure-guided drug design. This platform integrates and standardizes both experimental and computational protein structures from well-known public repositories like RCSB PDB and AlphaFoldDB, as well as proprietary data, while accommodating various file formats including PDBx/mmCIF and ModelCIF. Such a comprehensive strategy ensures easy accessibility to a diverse array of structural data, encompassing X-Ray, NMR, cryo-EM, and modeled structures, thereby fostering collaboration and boosting scientific research efforts. Beyond basic storage capabilities, 3decision® enhances its entries with important metadata and sequence information, detailing aspects such as protein-ligand interactions, antibody information, and binding site features. Its sophisticated analytical tools empower researchers to pinpoint potential druggable sites, assess off-target activities, and compare binding sites, thus transforming vast structural datasets into actionable insights. The platform's cloud-based functionality not only promotes effortless collaboration among research teams but also positions itself as an indispensable asset for driving forward drug discovery projects, ultimately contributing to the advancement of therapeutic solutions. Additionally, its user-friendly interface and robust support for data integration make it a favorite among scientists aiming for innovative breakthroughs in the field.

Media

Media

No images available

Integrations Supported

Additional information not provided

Integrations Supported

Additional information not provided

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

Swiss-PdbViewer

Date Founded

1994

Company Location

Switzerland

Company Website

spdbv.unil.ch/

Company Facts

Organization Name

Discngine

Date Founded

2004

Company Location

France

Company Website

www.discngine.com

Categories and Features

Categories and Features

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