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What is Loupe Browser?

Loupe Browser distinguishes itself as an effective visualization platform, equipped with intuitive features that are crucial for exploring and analyzing datasets from 10x Genomics Chromium and Visium. Furthermore, the LoupeR package streamlines the process of converting Seurat objects into formats that are compatible with Loupe Browser. The interactive capabilities of Loupe Browser are well-demonstrated through its application to a lung squamous cell carcinoma dataset. A key aspect of the user interface is the view panel, which displays individual points, each corresponding to a cell barcode, across various projections. Typically, each point represents the barcode of a single cell, facilitating detailed analysis. The default projection is a t-SNE plot generated by the cell ranger pipeline, but users also have access to other visualization options. They can easily drag the mouse over the cells to reposition the plot and utilize the mouse wheel or trackpad for zooming in or out. Additionally, when the mouse hovers over the plot, cluster labels appear, which is especially advantageous for analyzing datasets with many precomputed clusters. This feature significantly enriches the analytical process, allowing for easier identification and interpretation of intricate data patterns. With its user-centric design and functionality, Loupe Browser empowers researchers to gain deeper insights from their genomic data.

What is CellPort Cell Culture Suite?

CellPort is a cutting-edge SaaS platform specifically designed to meet the complex requirements of cell culture, passaging, line development, characterization, and banking. This platform acts as a comprehensive hub that manages cell cultures, oversees passaging protocols, and supports the development and characterization of cell lines, ultimately enhancing the efficiency of cell-based research projects. By merging scientific expertise with industry best practices, CellPort is consistently updated to reflect the newest innovations in laboratory technology and research strategies. Our dedicated team of scientists is committed to ensuring that CellPort remains at the leading edge of innovation, equipping researchers with the tools they need to stay ahead in their fields. Featuring a wide array of functionalities, a user-friendly interface, and a strong commitment to quality, CellPort is the ideal solution for laboratories aimed at optimizing their workflows, encouraging teamwork, and advancing scientific discoveries. In an era where efficiency and collaboration are paramount, CellPort proves to be an indispensable resource for researchers navigating the complexities of modern scientific inquiry.

Media

Media

Integrations Supported

Additional information not provided

Integrations Supported

Additional information not provided

API Availability

API Availability

Pricing Information

Pricing not provided

Pricing Information

Pricing not provided

Supported Platforms

Windows
Mac
Linux

Supported Platforms

SaaS

Customer Service / Support

Standard Support
Web-Based Support

Customer Service / Support

Standard Support
Web-Based Support

Training Options

Documentation Hub
On-Site Training

Training Options

Online Training

Company Facts

Organization Name

10x Genomics

Date Founded

2012

Company Location

United States

Company Website

www.10xgenomics.com/support/software/loupe-browser/latest

Company Facts

Organization Name

CellPort Software

Date Founded

2014

Company Location

United States

Company Website

www.cellportsoftware.com

Categories and Features

Bioinformatics

Not specified

Categories and Features

LIMS

Electronic Laboratory Notebook
Inventory Management
Lab Instrument Interface
Reporting & Statistics
Sample Tracking
Workflow Management

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