Ratings and Reviews 0 Ratings

Total
ease
features
design
support

This software has no reviews. Be the first to write a review.

Write a Review

Ratings and Reviews 0 Ratings

Total
ease
features
design
support

This software has no reviews. Be the first to write a review.

Write a Review

Alternatives to Consider

  • Jama Connect Reviews & Ratings
    383 Ratings
    Company Website
  • CrankWheel Reviews & Ratings
    215 Ratings
    Company Website
  • Wave Browser Reviews & Ratings
    52 Ratings
    Company Website
  • Highcharts Reviews & Ratings
    123 Ratings
    Company Website
  • BrandMap® 10 Reviews & Ratings
    Company Website
  • Vibe Retail Reviews & Ratings
    61 Ratings
    Company Website
  • HERE Enterprise Browser Reviews & Ratings
    2 Ratings
    Company Website
  • Gaffa Reviews & Ratings
    4 Ratings
    Company Website
  • TimeControl Reviews & Ratings
    1 Rating
    Company Website
  • Stratosphere Reviews & Ratings
    7 Ratings
    Company Website

What is Loupe Browser?

Loupe Browser distinguishes itself as an effective visualization platform, equipped with intuitive features that are crucial for exploring and analyzing datasets from 10x Genomics Chromium and Visium. Furthermore, the LoupeR package streamlines the process of converting Seurat objects into formats that are compatible with Loupe Browser. The interactive capabilities of Loupe Browser are well-demonstrated through its application to a lung squamous cell carcinoma dataset. A key aspect of the user interface is the view panel, which displays individual points, each corresponding to a cell barcode, across various projections. Typically, each point represents the barcode of a single cell, facilitating detailed analysis. The default projection is a t-SNE plot generated by the cell ranger pipeline, but users also have access to other visualization options. They can easily drag the mouse over the cells to reposition the plot and utilize the mouse wheel or trackpad for zooming in or out. Additionally, when the mouse hovers over the plot, cluster labels appear, which is especially advantageous for analyzing datasets with many precomputed clusters. This feature significantly enriches the analytical process, allowing for easier identification and interpretation of intricate data patterns. With its user-centric design and functionality, Loupe Browser empowers researchers to gain deeper insights from their genomic data.

What is Congenica?

We are leading the charge in precision medicine, significantly reducing the burden on healthcare systems through our pioneering automated solutions for analysis, diagnosis, and treatment that serve healthcare providers and patients around the world. Congenica was founded based on transformative research from the Wellcome Sanger Institute and the UK's National Health Service. Our solutions merge advanced technology, exceptional automation, and artificial intelligence, allowing our unique platform to be applied to a diverse range of human diseases where genomic data is essential for extracting actionable insights. As a digital health innovator, we focus on software and solutions for large-scale genomic data analysis and interpretation. Our fully automated platform, equipped with powerful APIs and machine learning features, is designed to alleviate the demands on specialist personnel, enhance case processing speed, accelerate decision-making, and streamline reporting. Our system meets rigorous certification standards, ensuring accuracy and security, which in turn supports clinical decisions with confidence in their outcomes. We remain committed to continuous innovation and expanding our capabilities to address the ever-changing requirements of the healthcare sector, ultimately striving to improve patient care and outcomes.

Media

Media

Integrations Supported

Additional information not provided

Integrations Supported

Additional information not provided

API Availability

Has API

API Availability

Has API

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Pricing Information

Pricing not provided.
Free Trial Offered?
Free Version

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Supported Platforms

SaaS
Android
iPhone
iPad
Windows
Mac
On-Prem
Chromebook
Linux

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Customer Service / Support

Standard Support
24 Hour Support
Web-Based Support

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Training Options

Documentation Hub
Webinars
Online Training
On-Site Training

Company Facts

Organization Name

10x Genomics

Date Founded

2012

Company Location

United States

Company Website

www.10xgenomics.com/support/software/loupe-browser/latest

Company Facts

Organization Name

Congenica

Date Founded

2014

Company Location

United Kingdom

Company Website

www.congenica.com

Categories and Features

Categories and Features

Popular Alternatives

OmnibusX Reviews & Ratings

OmnibusX

OmnibusX Company Limited

Popular Alternatives

XetaBase Reviews & Ratings

XetaBase

Zetta Genomics
VSClinical Reviews & Ratings

VSClinical

Golden Helix
Parse Biosciences Evercode Reviews & Ratings

Parse Biosciences Evercode

Parse Biosciences
Alissa Interpret Reviews & Ratings

Alissa Interpret

Agilent Technologies
Emedgene Reviews & Ratings

Emedgene

Illumina
OmicsBox Reviews & Ratings

OmicsBox

BioBam Bioinformatics S.L.